SUBDIR += orthanc

# Created by: maintainer.freebsd@xpoundit.com

# $FreeBSD$

PORTNAME=	orthanc

PORTVERSION=	1.7.2

CATEGORIES=	science

MASTER_SITES=	http://orthanc-server.com/downloads/get.php?path=/orthanc/:main \

		http://orthanc.osimis.io/ThirdPartyDownloads/:thirdparty

DISTFILES=	Orthanc-${PORTVERSION}.tar.gz:main \

		civetweb-1.12-fixed.tar.gz:thirdparty \

		e2fsprogs-1.44.5.tar.gz:thirdparty

DIST_SUBDIR=	${PORTNAME}

EXTRACT_ONLY=	Orthanc-${PORTVERSION}.tar.gz

MAINTAINER=	maintainer.freebsd@xpoundit.com

COMMENT=	Orthanc is a DICOM server for healthcare and medical research

LICENSE=	GPLv3

LICENSE_FILE=	${WRKSRC}/COPYING

LIB_DEPENDS=	libboost_atomic.so:devel/boost-libs \

		libcharls.so:graphics/dcmtk \

		libcurl.so:ftp/curl \

		libgtest.so:devel/googletest \

		libicudata.so:devel/icu \

		libjbig.so:graphics/jbigkit \

		libjpeg.so:graphics/jpeg-turbo \

		libjsoncpp.so:devel/jsoncpp \

		libnghttp2.so:www/libnghttp2 \

		libpng16.so:graphics/png \

		libpugixml.so:textproc/pugixml \

		libsqlite3.so:databases/sqlite3 \

		libtiff.so:graphics/tiff \

		libuuid.so:misc/e2fsprogs-libuuid \

		libxml2.so:textproc/libxml2

USES=		cmake dos2unix iconv jpeg lua python:build ssl

WRKSRC=		${WRKDIR}/Orthanc-${PORTVERSION}

CMAKE_SOURCE_PATH= ${WRKSRC}/OrthancServer

CMAKE_ARGS=	-DDCMTK_LIBRARIES="dcmdsig;charls;dcmjpls" \

		-DDCMTK_DIR="${LOCALBASE}" \

		-DDCMTK_DICTIONARY_DIR="${LOCALBASE}/share/dcmtk" \

		-DUSE_SYSTEM_CIVETWEB=OFF \

		-DUSE_SYSTEM_UUID=OFF \

		-DUNIT_TESTS_WITH_HTTP_CONNEXIONS=OFF \

		-DBUILD_CONNECTIVITY_CHECKS=OFF

CFLAGS+=	-I${LOCALBASE}/include \

		-DNDEBUG

CXXFLAGS+=	-DNDEBUG

DOS2UNIX_FILES=	CMakeLists.txt

USE_LDCONFIG=	yes

USE_RC_SUBR=	orthanc

USERS=		orthanc

GROUPS=		orthanc

PLIST_SUB+=	PORTVERSION=${PORTVERSION}

post-patch:

	${MKDIR} ${CMAKE_SOURCE_PATH}/ThirdPartyDownloads

	${MKDIR} ${CMAKE_SOURCE_PATH}/Plugins/Samples/ConnectivityChecks/ThirdPartyDownloads

	${CP} ${DISTDIR}/${DIST_SUBDIR}/civetweb-1.12-fixed.tar.gz ${CMAKE_SOURCE_PATH}/ThirdPartyDownloads

	${CP} ${DISTDIR}/${DIST_SUBDIR}/e2fsprogs-1.44.5.tar.gz ${CMAKE_SOURCE_PATH}/ThirdPartyDownloads

post-install:

	${MKDIR} ${STAGEDIR}/var/db/orthanc/db/db-v5

	${MKDIR} ${STAGEDIR}${DATADIR}/plugins

	${MKDIR} ${STAGEDIR}${ETCDIR}

	${REINPLACE_CMD} -e 's|%%PREFIX%%|${PREFIX}|g' ${CMAKE_SOURCE_PATH}/Resources/Configuration.json

	${CP} ${CMAKE_SOURCE_PATH}/Resources/Configuration.json ${STAGEDIR}${ETCDIR}/orthanc.json.sample

.include <bsd.port.mk>

TIMESTAMP = 1596543829

SHA256 (orthanc/Orthanc-1.7.2.tar.gz) = ea167b4688db7cd8855a1758f289b21d490e7d97afcc405f12d881b22bf17e9b

SIZE (orthanc/Orthanc-1.7.2.tar.gz) = 1644200

SHA256 (orthanc/civetweb-1.12-fixed.tar.gz) = 0e81fc252166302a33abd68e98936fb24d9b008b5816fe50edd6b12256768e41

SIZE (orthanc/civetweb-1.12-fixed.tar.gz) = 3035855

SHA256 (orthanc/e2fsprogs-1.44.5.tar.gz) = 2e211fae27ef74d5af4a4e40b10b8df7f87c655933bd171aab4889bfc4e6d1cc

SIZE (orthanc/e2fsprogs-1.44.5.tar.gz) = 7619237

#!/bin/sh

# $FreeBSD$

#

# PROVIDE: orthanc

# REQUIRE: LOGIN

# KEYWORD: shutdown

#

# Add these lines to /etc/rc.conf.local or /etc/rc.conf

# to enable this service:

#

# orthanc_enable (bool):	Set to NO by default.

#				Set it to YES to enable Orthanc.

# orthanc_flags (str):		Set to %%ETCDIR%%/orthanc.json

#				by default.

. /etc/rc.subr

name=orthanc

rcvar=orthanc_enable

desc="RESTful DICOM server for healthcare and medical research"

load_rc_config $name

: ${orthanc_enable:=NO}

: ${orthanc_flags="%%ETCDIR%%/orthanc.json"}

start_precmd=orthanc_prestart

pidfile=/var/run/orthanc.pid

procname=%%PREFIX%%/sbin/Orthanc

command=/usr/sbin/daemon

command_args=" -f -p ${pidfile} -u orthanc ${procname} ${orthanc_flags}"

orthanc_prestart()

{

	# Have to empty rc_flags so they don't get passed to daemon(8)

	rc_flags=""

}

run_rc_command "$1"

--- CMakeLists.txt.orig	2020-04-01 15:55:47 UTC

+++ CMakeLists.txt

@@ -519,8 +519,8 @@ if (ENABLE_PLUGINS AND BUILD_CONNECTIVITY_CHECKS)

     list(GET CMAKE_FIND_LIBRARY_PREFIXES 0 Prefix)

     list(GET CMAKE_FIND_LIBRARY_SUFFIXES 0 Suffix)

     install(FILES

-      ${CMAKE_CURRENT_BINARY_DIR}/${Prefix}ConnectivityChecks${Suffix}

-      ${CMAKE_CURRENT_BINARY_DIR}/${Prefix}ConnectivityChecks${Suffix}.${ORTHANC_VERSION}

+      ${CMAKE_CURRENT_BINARY_DIR}/ConnectivityChecks-build/${Prefix}ConnectivityChecks${Suffix}

+      ${CMAKE_CURRENT_BINARY_DIR}/ConnectivityChecks-build/${Prefix}ConnectivityChecks${Suffix}.${ORTHANC_VERSION}

       DESTINATION "share/orthanc/plugins")

   endif()

 endif()

--- OrthancServer/Resources/Configuration.json.orig	2020-07-08 09:50:26 UTC

+++ OrthancServer/Resources/Configuration.json

@@ -10,12 +10,12 @@

   // Path to the directory that holds the heavyweight files (i.e. the

   // raw DICOM instances). Backslashes must be either escaped by

   // doubling them, or replaced by forward slashes "/".

-  "StorageDirectory" : "OrthancStorage",

+  "StorageDirectory" : "/var/db/orthanc/db-v5",

   // Path to the directory that holds the SQLite index (if unset, the

   // value of StorageDirectory is used). This index could be stored on

   // a RAM-drive or a SSD device for performance reasons.

-  "IndexDirectory" : "OrthancStorage",

+  "IndexDirectory" : "/var/db/orthanc/db-v5",

   // Path to the directory where Orthanc stores its large temporary

   // files. The content of this folder can be safely deleted if

@@ -53,6 +53,7 @@

   // find shared libraries. Backslashes must be either escaped by

   // doubling them, or replaced by forward slashes "/".

   "Plugins" : [

+    "%%PREFIX%%/share/orthanc/plugins/"

   ],

   // Maximum number of processing jobs that are simultaneously running

Orthanc aims at providing a simple, yet powerful standalone DICOM server. It

is designed to improve the DICOM flows in hospitals and to support research

about the automated analysis of medical images. Orthanc lets its users focus

on the content of the DICOM files, hiding the complexity of the DICOM format

and of the DICOM protocol.

Orthanc can turn any computer running Windows, Linux, FreeBSD or OS X into a

DICOM store (in other words, a mini-PACS system). Its architecture is

lightweight and standalone, meaning that no complex database administration

is required, nor the installation of third-party dependencies.

What makes Orthanc unique is the fact that it provides a RESTful API. Thanks

to this major feature, it is possible to drive Orthanc from any computer

language. The DICOM tags of the stored medical images can be downloaded in

the JSON file format. Furthermore, standard PNG images can be generated

on-the-fly from the DICOM instances by Orthanc.

Orthanc also features a plugin mechanism to add new modules that extends the

core capabilities of its REST API. A Web viewer, a PostgreSQL database

back-end, a MySQL database back-end, and a reference implementation of

DICOMweb are currently freely available as plugins.

WWW: https://www.orthanc-server.com/

@owner orthanc

@group orthanc

@mode 700

@dir %%DATADIR%%/plugins

@dir /var/db/orthanc/db/db-v5

@dir /var/db/orthanc/db

@dir /var/db/orthanc

@mode 600

@sample %%ETCDIR%%/orthanc.json.sample

@mode

include/orthanc/OrthancCDatabasePlugin.h

include/orthanc/OrthancCPlugin.h

bin/OrthancRecoverCompressedFile

sbin/Orthanc

%%DATADIR%%/plugins/%%LUA_LIBDIR%%ModalityWorklists.so

%%DATADIR%%/plugins/%%LUA_LIBDIR%%ModalityWorklists.so.%%PORTVERSION%%

%%DATADIR%%/plugins/%%LUA_LIBDIR%%ServeFolders.so

%%DATADIR%%/plugins/%%LUA_LIBDIR%%ServeFolders.so.%%PORTVERSION%%