Bug 229180

Summary: [NEW PORT] biology/exonerate: Generic tool for sequence alignment
Product: Ports & Packages Reporter: Motomichi Matsuzaki <mzaki>
Component: Individual Port(s)Assignee: Yuri Victorovich <yuri>
Status: Closed FIXED    
Severity: Affects Some People CC: yuri
Priority: ---    
Version: Latest   
Hardware: Any   
OS: Any   
Attachments:
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Description Motomichi Matsuzaki 2018-06-20 13:38:45 UTC
Created attachment 194427 [details]
svn diff

Exonerate is a tool for various types of pairwise sequence comparison.
It allows us to align sequences using many alignment models including
est2genome, protein2genome, and so on.

WWW: https://www.ebi.ac.uk/about/vertebrate-genomics/software/exonerate

Tested by: poudriere testport & make test (amd64/i386 11.1/10.4)
Comment 1 commit-hook freebsd_committer 2018-07-13 07:02:47 UTC
A commit references this bug:

Author: yuri
Date: Fri Jul 13 07:02:18 UTC 2018
New revision: 474558
URL: https://svnweb.freebsd.org/changeset/ports/474558

Log:
  New port: biology/exonerate: Generic tool for sequence alignment

  PR:		229180
  Submitted by:	Motomichi Matsuzaki <mzaki@niid.go.jp>

Changes:
  head/biology/Makefile
  head/biology/exonerate/
  head/biology/exonerate/Makefile
  head/biology/exonerate/distinfo
  head/biology/exonerate/pkg-descr
  head/biology/exonerate/pkg-plist
Comment 2 Yuri Victorovich freebsd_committer 2018-07-13 07:02:54 UTC
Committed with small changes.
Thank you for your contribution!