Bug 133273 - [NEW PORT]biology/p5-Bio-Glite:An Perl Interface to G-language
Summary: [NEW PORT]biology/p5-Bio-Glite:An Perl Interface to G-language
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Martin Wilke
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2009-04-01 15:50 UTC by wenheping
Modified: 2009-04-02 19:30 UTC (History)
0 users

See Also:


Attachments
file.shar (2.62 KB, text/plain)
2009-04-01 15:50 UTC, wenheping
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Description wenheping 2009-04-01 15:50:01 UTC
Bio::Glite is an interface to G-language Genome Analysis Environment
through its REST web service (http://www.g-language.org). This module
allows almost everything G-language GAE can do, without installing
all necessary tookits and modules.

Advantage of this module over the standard installation of
G-language GAE package is:
   1. Easy installation from CPAN
   2. Extremely light-weight (less than 1000 lines of code)
   3. Does not require much CPU/RAM (all calculation is done on
the cloud)

Disadvantages includes:
   1. Slower analysis speed
   2. Internet connection is required
   3. No other software interfaces such as the G-language Shell

WWW: http://search.cpan.org/dist/Bio-Glite/

Fix: Patch attached with submission follows:
Comment 1 Edwin Groothuis freebsd_committer 2009-04-01 15:50:15 UTC
Responsible Changed
From-To: freebsd-ports-bugs->miwi

miwi@ wants his PRs (via the GNATS Auto Assign Tool)
Comment 2 dfilter service freebsd_committer 2009-04-02 19:25:10 UTC
miwi        2009-04-02 18:24:59 UTC

  FreeBSD ports repository

  Modified files:
    biology              Makefile 
  Added files:
    biology/p5-Bio-Glite Makefile distinfo pkg-descr pkg-plist 
  Log:
  Bio::Glite is an interface to G-language Genome Analysis Environment
  through its REST web service (http://www.g-language.org). This module
  allows almost everything G-language GAE can do, without installing
  all necessary tookits and modules.
  
  Advantage of this module over the standard installation of
  G-language GAE package is:
     1. Easy installation from CPAN
     2. Extremely light-weight (less than 1000 lines of code)
     3. Does not require much CPU/RAM (all calculation is done on
  the cloud)
  
  Disadvantages includes:
     1. Slower analysis speed
     2. Internet connection is required
     3. No other software interfaces such as the G-language Shell
  
  WWW: http://search.cpan.org/dist/Bio-Glite/
  
  PR:             ports/133273
  Submitted by:   Wen Heping <wenheping at gmail.com>
  
  Revision  Changes    Path
  1.105     +1 -0      ports/biology/Makefile
  1.1       +25 -0     ports/biology/p5-Bio-Glite/Makefile (new)
  1.1       +3 -0      ports/biology/p5-Bio-Glite/distinfo (new)
  1.1       +18 -0     ports/biology/p5-Bio-Glite/pkg-descr (new)
  1.1       +5 -0      ports/biology/p5-Bio-Glite/pkg-plist (new)
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Comment 3 Martin Wilke freebsd_committer 2009-04-02 19:26:40 UTC
State Changed
From-To: open->closed

Committed. Thanks!
Comment 4 dfilter service freebsd_committer 2009-04-02 19:27:01 UTC
miwi        2009-04-02 18:26:51 UTC

  FreeBSD ports repository

  Modified files:
    databases            Makefile 
  Added files:
    databases/p5-Test-Database Makefile distinfo pkg-descr 
                               pkg-plist 
  Log:
  There's plenty of modules which need a database, and they all have
  to be configured differently and they're always a PITA when you first
  install and each and every time they upgrade.
  
  Test::Database provides a simple way for test authors to request
  a test database, without worrying about environment variables or the
  test host configuration.
  
  WWW: http://search.cpan.org/dist/Test-Database/
  
  PR:             ports/133273
  Submitted by:   Wen Heping <wenheping at gmail.com>
  
  Revision  Changes    Path
  1.755     +1 -0      ports/databases/Makefile
  1.1       +33 -0     ports/databases/p5-Test-Database/Makefile (new)
  1.1       +3 -0      ports/databases/p5-Test-Database/distinfo (new)
  1.1       +9 -0      ports/databases/p5-Test-Database/pkg-descr (new)
  1.1       +14 -0     ports/databases/p5-Test-Database/pkg-plist (new)
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