Bug 177257 - biology/seaview: Update to version 4.4.1
Summary: biology/seaview: Update to version 4.4.1
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Martin Wilke
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2013-03-22 18:40 UTC by tkato432
Modified: 2013-03-26 01:10 UTC (History)
0 users

See Also:


Attachments
file.diff (2.90 KB, patch)
2013-03-22 18:40 UTC, tkato432
no flags Details | Diff
biology_seaview.diff (2.90 KB, patch)
2013-03-25 17:58 UTC, tkato432
no flags Details | Diff

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Description tkato432 2013-03-22 18:40:04 UTC
- Update to version 4.4.1
Comment 1 Edwin Groothuis freebsd_committer freebsd_triage 2013-03-22 18:41:34 UTC
Responsible Changed
From-To: freebsd-ports-bugs->miwi

miwi@ wants this submitter's PRs (via the GNATS Auto Assign Tool)
Comment 2 Martin Wilke freebsd_committer freebsd_triage 2013-03-24 11:45:56 UTC
State Changed
From-To: open->feedback

build fails http://miwibox.org/tb/index.php?action=describe_port&id=1494
Comment 3 tkato432 2013-03-25 17:58:41 UTC
Here is the corrected patch.
Comment 4 Martin Wilke freebsd_committer freebsd_triage 2013-03-26 01:08:46 UTC
State Changed
From-To: feedback->closed

Committed. Thanks!
Comment 5 dfilter service freebsd_committer freebsd_triage 2013-03-26 01:08:54 UTC
Author: miwi
Date: Tue Mar 26 01:08:40 2013
New Revision: 315253
URL: http://svnweb.freebsd.org/changeset/ports/315253

Log:
  - Update to 4.4.1
  
  PR:		177257
  Submitted by:	Ports Fury

Modified:
  head/biology/seaview/Makefile
  head/biology/seaview/distinfo   (contents, props changed)

Modified: head/biology/seaview/Makefile
==============================================================================
--- head/biology/seaview/Makefile	Tue Mar 26 01:07:00 2013	(r315252)
+++ head/biology/seaview/Makefile	Tue Mar 26 01:08:40 2013	(r315253)
@@ -2,8 +2,7 @@
 # $FreeBSD$
 
 PORTNAME=	seaview
-PORTVERSION=	4.4.0
-PORTREVISION=	1
+PORTVERSION=	4.4.1
 PORTEPOCH=	1
 CATEGORIES=	biology
 MASTER_SITES=	http://pbil.univ-lyon1.fr/software/seaview_data/archive/
@@ -12,14 +11,7 @@ DISTNAME=	${PORTNAME}_${PORTVERSION}
 MAINTAINER=	ports@FreeBSD.org
 COMMENT=	Multiple DNA/protein sequence alignment editor
 
-LIB_DEPENDS=	pthread-stubs:${PORTSDIR}/devel/libpthread-stubs \
-		jpeg:${PORTSDIR}/graphics/jpeg \
-		png15:${PORTSDIR}/graphics/png \
-		freetype:${PORTSDIR}/print/freetype2 \
-		expat:${PORTSDIR}/textproc/expat2 \
-		fontconfig:${PORTSDIR}/x11-fonts/fontconfig \
-		fltk:${PORTSDIR}/x11-toolkits/fltk \
-		xcb:${PORTSDIR}/x11/libxcb
+LIB_DEPENDS=	fltk:${PORTSDIR}/x11-toolkits/fltk
 
 OPTIONS_DEFINE=	PDFLIB
 OPTIONS_DEFAULT=PDFLIB
@@ -27,7 +19,7 @@ PDFLIB_DESC=	PDFlib support
 
 WRKSRC=		${WRKDIR}/${PORTNAME}
 
-USE_XORG=	x11 xau xdmcp xext xft xinerama xrender
+USE_XORG=	xext xft xinerama
 USE_GMAKE=	yes
 MAKE_ENV=	HELPFILE='-DDEFAULT_HELPFILE=\"${DATADIR}/seaview.html\"' \
 		PHYMLNAME='-DPHYMLNAME=\"phyml\"' \
@@ -38,12 +30,12 @@ MAKE_ENV=	HELPFILE='-DDEFAULT_HELPFILE=\
 ALL_TARGET=	${PORTNAME}
 MAKE_JOBS_SAFE=	yes
 
-DESKTOP_ENTRIES="SeaView" "${COMMENT}" "" \
-		"${PORTNAME}" "Biology;Science;" "true"
-
 PLIST_FILES=	bin/seaview %%DATADIR%%/seaview.html
 PLIST_DIRS=	%%DATADIR%%
 
+DESKTOP_ENTRIES="SeaView" "${COMMENT}" "" \
+		"${PORTNAME}" "Biology;Science;" "true"
+
 .include <bsd.port.options.mk>
 
 .if ${PORT_OPTIONS:MPDFLIB}
@@ -55,17 +47,17 @@ MAKE_ENV+=	PDF_PS_FLAGS='-DNO_PDF'
 
 post-patch:
 	@${REINPLACE_CMD} -e \
-		's|^PDF_PS_FLAGS |#PDF_PS_FLAGS | ; \
-		 s|^FLTK |#FLTK | ; \
-		 s|^USE_XFT |#USE_XFT | ; \
-		 s|^CC |#CC | ; \
-		 s|^CXX |#CXX | ; \
-		 s|^OPT |#OPT | ; \
-		 s|-lpthread|${PTHREAD_LIBS}|' ${WRKSRC}/Makefile
+		's|^\(PDF_PS_FLAGS\) |#\1 | ; \
+		 s|^\(FLTK\) |#\1 | ; \
+		 s|^\(USE_XFT\) |#\1 | ; \
+		 s|^\(CC\) |#\1 | ; \
+		 s|^\(CXX\) |#\1 | ; \
+		 s|^\(OPT\) |#\1 | ; \
+		 s|-lpthread|-pthread|' ${WRKSRC}/Makefile
 
 do-install:
-	${INSTALL_PROGRAM} ${WRKSRC}/${PORTNAME} ${PREFIX}/bin
+	(cd ${WRKSRC} && ${INSTALL_PROGRAM} seaview ${PREFIX}/bin)
 	@${MKDIR} ${DATADIR}
-	${INSTALL_DATA} ${WRKSRC}/seaview.html ${DATADIR}
+	(cd ${WRKSRC} && ${INSTALL_DATA} seaview.html ${DATADIR})
 
 .include <bsd.port.mk>

Modified: head/biology/seaview/distinfo
==============================================================================
--- head/biology/seaview/distinfo	Tue Mar 26 01:07:00 2013	(r315252)
+++ head/biology/seaview/distinfo	Tue Mar 26 01:08:40 2013	(r315253)
@@ -1,2 +1,2 @@
-SHA256 (seaview_4.4.0.tar.gz) = e1dcaef67cb93da63bfa6fa102042340297c18055928645f03defb6547e9ede3
-SIZE (seaview_4.4.0.tar.gz) = 309611
+SHA256 (seaview_4.4.1.tar.gz) = d994960fe8c65716a91134d11784a65c762579eb34bf8762af2d8b5e518c3ab4
+SIZE (seaview_4.4.1.tar.gz) = 308872
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