Bug 179224 - biology/phylip: Update to version 3.695
Summary: biology/phylip: Update to version 3.695
Status: Closed FIXED
Alias: None
Product: Ports & Packages
Classification: Unclassified
Component: Individual Port(s) (show other bugs)
Version: Latest
Hardware: Any Any
: Normal Affects Only Me
Assignee: Martin Wilke
URL:
Keywords:
Depends on:
Blocks:
 
Reported: 2013-06-02 19:10 UTC by tkato432
Modified: 2013-06-04 11:10 UTC (History)
0 users

See Also:


Attachments
file.diff (3.18 KB, patch)
2013-06-02 19:10 UTC, tkato432
no flags Details | Diff

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Description tkato432 2013-06-02 19:10:06 UTC
- Update to version 3.695
Comment 1 Edwin Groothuis freebsd_committer freebsd_triage 2013-06-02 19:11:42 UTC
Responsible Changed
From-To: freebsd-ports-bugs->miwi

miwi@ wants this submitter's PRs (via the GNATS Auto Assign Tool)
Comment 2 Martin Wilke freebsd_committer freebsd_triage 2013-06-04 11:01:15 UTC
State Changed
From-To: open->closed

Committed. Thanks!
Comment 3 dfilter service freebsd_committer freebsd_triage 2013-06-04 11:02:38 UTC
Author: miwi
Date: Tue Jun  4 10:02:30 2013
New Revision: 319847
URL: http://svnweb.freebsd.org/changeset/ports/319847

Log:
  - Update to 3.6.9.5
  
  PR:		179224
  Submitted by:	Ports Fury

Modified:
  head/biology/phylip/Makefile   (contents, props changed)
  head/biology/phylip/distinfo   (contents, props changed)
  head/biology/phylip/pkg-plist   (contents, props changed)

Modified: head/biology/phylip/Makefile
==============================================================================
--- head/biology/phylip/Makefile	Tue Jun  4 10:01:59 2013	(r319846)
+++ head/biology/phylip/Makefile	Tue Jun  4 10:02:30 2013	(r319847)
@@ -1,42 +1,54 @@
-# New ports collection makefile for:	phylip
-# Date created:				4 July 2000
-# Whom:					dbader@eece.unm.edu
-#
+# Created by: dbader@eece.unm.edu
 # $FreeBSD$
-#
 
 PORTNAME=	phylip
-PORTVERSION=	3.69
+PORTVERSION=	3.695
 PORTEPOCH=	1
 CATEGORIES=	biology
 MASTER_SITES=	http://evolution.gs.washington.edu/phylip/download/
 
 MAINTAINER=	ports@FreeBSD.org
-COMMENT=	A Phylogeny Inference Package
+COMMENT=	Phylogeny Inference Package
 
 BUILD_DEPENDS=	bash:${PORTSDIR}/shells/bash
 
-BUILD_WRKSRC=	${WRKSRC}/src
-INSTALL_WRKSRC=	${WRKSRC}/src
+OPTIONS_DEFINE=	DOCS EXAMPLES
+
+BUILD_WRKSRC=	${WRKSRC}/source
+INSTALL_WRKSRC=	${WRKSRC}/source
 
 USE_XORG=	x11 xaw xt
 USE_GMAKE=	yes
-MAKE_ARGS=	CC="${CC}" CFLAGS="${CFLAGS}" \
+MAKEFILE=	Makefile.unx
+MAKE_ARGS=	CC="${CC}" CFLAGS="${CFLAGS} -DUNX" \
 		DFLAGS="${CFLAGS} -DX -I${LOCALBASE}/include" \
 		DLIBS="-L${LOCALBASE}/lib -lX11 -lXaw -lXt -lm"
+MAKE_JOBS_SAFE=	yes
 
 PORTDOCS=	*
+PORTEXAMPLES=	*
+
+.include <bsd.port.options.mk>
 
 post-install:
 	@cd ${WRKSRC}/exe && \
-		${FIND} . -not -type d -not -name 'font*' -exec ${INSTALL_PROGRAM} "{}" "${PREFIX}/bin/{}" \;
-	${MKDIR} ${DATADIR}
+		${FIND} . -maxdepth 1 -not -type d -not -name '*.jar' \
+		-not -name '*.unx' -not -name 'font*' -not -name '*.so' \
+		-exec ${INSTALL_PROGRAM} "{}" "${PREFIX}/bin/{}" \;
 	@cd ${WRKSRC}/exe && \
-		${FIND} . -not -type d -name 'font*' -exec ${INSTALL_DATA} "{}" "${DATADIR}/{}" \;
-.if !defined(NOPORTDOCS)
-	${MKDIR} ${DOCSDIR}
-	@cd ${WRKSRC}/doc && \
-		${FIND} . -not -type d -exec ${INSTALL_DATA} "{}" "${DOCSDIR}/{}" \;
+		${FIND} . -maxdepth 1 -not -type d -name "*.so" \
+		-exec ${INSTALL_DATA} "{}" "${PREFIX}/lib/{}" \;
+	@${MKDIR} ${DATADIR}
+	@cd ${WRKSRC}/exe && \
+		${FIND} . -maxdepth 1 -not -type d -name 'font*' \
+		-exec ${INSTALL_DATA} "{}" "${DATADIR}/{}" \;
+.if ${PORT_OPTIONS:MDOCS}
+	@${MKDIR} ${DOCSDIR}
+	@(cd ${WRKSRC}/doc && ${COPYTREE_SHARE} . ${DOCSDIR})
+.endif
+.if ${PORT_OPTIONS:MEXAMPLES}
+	@${MKDIR} ${EXAMPLESDIR}
+	@(cd ${WRKSRC}/exe && ${COPYTREE_SHARE} testdata ${EXAMPLESDIR})
 .endif
 
 .include <bsd.port.mk>

Modified: head/biology/phylip/distinfo
==============================================================================
--- head/biology/phylip/distinfo	Tue Jun  4 10:01:59 2013	(r319846)
+++ head/biology/phylip/distinfo	Tue Jun  4 10:02:30 2013	(r319847)
@@ -1,2 +1,2 @@
-SHA256 (phylip-3.69.tar.gz) = 27947ce8dab4416e4823db38b3d1b0bf17bc545b6907cf09dcf6177df94c1a8f
-SIZE (phylip-3.69.tar.gz) = 1511935
+SHA256 (phylip-3.695.tar.gz) = 846b9acf5f9d30520f703c6541ec945378b1c9355bc3f035e0ea721931b7b8ac
+SIZE (phylip-3.695.tar.gz) = 4364943

Modified: head/biology/phylip/pkg-plist
==============================================================================
--- head/biology/phylip/pkg-plist	Tue Jun  4 10:01:59 2013	(r319846)
+++ head/biology/phylip/pkg-plist	Tue Jun  4 10:02:30 2013	(r319847)
@@ -33,6 +33,8 @@ bin/restml
 bin/retree
 bin/seqboot
 bin/treedist
+lib/libdrawgram.so
+lib/libdrawtree.so
 %%DATADIR%%/font1
 %%DATADIR%%/font2
 %%DATADIR%%/font3
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